Some comment first, the 102 "whip plus about 3' make it close to 11 feet off the ground.
While the long whip normally would be the most efficient it's really not a good setup from the stand point of hitting things as you travel.
the trunk lid has two hinges and a latch as the only DC connections to the rest of the body.
The DC connections is not the important parameter in your case.
The RF paths are dominate and is why your having an issue.
Simply stated the whip has to be tuned for the specific setup you want to run.
Just bolting it on and expecting a match is never guaranteed.
You either have to adjust the length of the whip to Resonate with the body or use a matching network.
What you need to understand is the whip is "only half" of the whole antenna system. The car body is the other half.
Since bodies take on different shapes and sizes and configurations you have to do some matching work to get a match you can accept.
What is happening when you lift the trunk lid is the capacity of the antenna to the body and just under it is changed.
When this happens the impedance of the whip at the feed point changes closer to the coax value of 50 ohms hence the SWR comes down.
It could have just happened to work the other way where the match got worse when you opened the lid but that was not your luck.
To get this system into match, first get as much bonding of the trunk lid to the body as practical then either change the length of the whip or use a matching network to transform the antenna impedance at it's feed point to the feedline impedance.
This is the way Ham radio does it.
IMO you should consider a good base loaded whip that has an adjustable whip height.
Going this route accomplishes all the same things mentioned above for obvious reasons.
The base loading coil is already designed to effect a resonance and a match along with the whip length for 11 meter use as opposed to just plopping a big whip on and having a hassle with getting it tuned and matched.
This is why you don't see a lot of long whips used due to the length and matching problems with a lot of different mounting situations.
I'm sure all this is not what you wanted to hear but it can be done if you understand what needs to be done and work to accomplish it as a lot of trial and testing.
The way I would approach it is to use an antenna analyzer to see what the impedance is now, then make the changes to get it to where it needs to be.
An SWR meter can be used but your working half blind with it, not seeing anything but he results of a guess driven change.
I wanted this reply to be both educational and offer two solutions for you.
Good luck.